{ "_id": "6acb49ecfe5cc25786e8d883", "Package": "DRaWR", "Title": "Discriminative Random Walk with Restart", "Version": "1.0.3", "Authors@R": "person(\"Charles\", \"Blatti\", email = \"blatti@illinois.edu\", role = c(\"aut\", \"cre\"))", "Author": "Charles Blatti [aut, cre]", "Maintainer": "Charles Blatti ", "Description": "We present DRaWR, a network-based method for ranking genes\nor properties related to a given gene set. Such related genes\nor properties are identified from among the nodes of a large,\nheterogeneous network of biological information. Our method\ninvolves a random walk with restarts, performed on an initial\nnetwork with multiple node and edge types, preserving more of\nthe original, specific property information than current\nmethods that operate on homogeneous networks. In this first\nstage of our algorithm, we find the properties that are the\nmost relevant to the given gene set and extract a subnetwork of\nthe original network, comprising only the relevant properties.\nWe then rerank genes by their similarity to the given gene set,\nbased on a second random walk with restarts, performed on the\nabove subnetwork.", "License": "GPL-2", "LazyData": "true", "RoxygenNote": "5.0.1.9000", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-11 08:25:15 UTC", "User": "root" }, "Repository": "https://cblatti3.r-universe.dev", "Date/Publication": "2022-03-24 13:10:02 UTC", "RemoteUrl": "https://github.com/cran/DRaWR", "RemoteRef": "HEAD", "RemoteSha": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "_user": "cblatti3", "_type": "src", "_file": "DRaWR_1.0.3.tar.gz", "_fileid": "https://r2.ropensci.org/9f842ec935566da1203530de0061e9d3a5ca2b9d63a19ca3e5067527d863dcc5", "_filesize": 99818, "_sha256": "9f842ec935566da1203530de0061e9d3a5ca2b9d63a19ca3e5067527d863dcc5", "_expires": "2027-01-19T08:33:46.000Z", "_created": "2026-10-11T08:25:15.000Z", "_published": "2026-10-11T08:33:48.116Z", "_buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 114426683601, "time": 137, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11697205127" }, { "job": 114426683664, "time": 133, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11697075560" }, { "job": 114426683608, "time": 166, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11697365099" }, { "job": 114426683576, "time": 168, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11697300270" }, { "job": 114426251891, "time": 146, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11696493668" }, { "job": 114426683610, "time": 95, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11696034921" }, { "job": 114426683632, "time": 82, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11696648477" }, { "job": 114426683626, "time": 61, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11696706915" }, { "job": 114426683615, "time": 67, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11696915749" } ], "_upstream": "https://github.com/cran/DRaWR", "_commit": { "id": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "author": "Charles Blatti ", "committer": "cran-robot ", "message": "version 1.0.3\n", "time": 1648127402 }, "_maintainer": { "name": "Charles Blatti", "email": "blatti@illinois.edu", "login": "cblatti3", "description": "", "uuid": 10409079 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.0", "role": "Depends" }, { "package": "Matrix", "role": "Imports" }, { "package": "ROCR", "role": "Imports" }, { "package": "methods", "role": "Imports" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "cblatti3", "count": 2, "uuid": 10409079 } ], "_userbio": { "uuid": 10409079, "type": "user", "name": "Charles Blatti", "followers": 3 }, "_downloads": { "count": 342, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/DRaWR" }, "_mentions": 3, "_searchresults": 7, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/DRaWR.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt" ], "_realowner": "cblatti3", "_cranurl": false, "_releases": [ { "version": "1.0.1", "date": "2016-02-04" }, { "version": "1.0.3", "date": "2022-03-24" } ], "_exports": [ "DRaWR", "RWR", "threeCol2listMat", "threeCol2MaxMat" ], "_datasets": [ { "name": "transmat", "title": "Sample transition matrix.", "object": "transmat", "class": [ "dgCMatrix" ], "fields": [], "table": false, "tojson": false } ], "_help": [ { "page": "DRaWR", "title": "DRaWR", "topics": [ "DRaWR" ] }, { "page": "RWR", "title": "RWR", "topics": [ "RWR" ] }, { "page": "threeCol2listMat", "title": "threeCol2listMat", "topics": [ "threeCol2listMat" ] }, { "page": "threeCol2MaxMat", "title": "threeCol2MaxMat", "topics": [ "threeCol2MaxMat" ] }, { "page": "transmat", "title": "Sample transition matrix.", "topics": [ "transmat" ] } ], "_rundeps": [ "bitops", "caTools", "gplots", "gtools", "KernSmooth", "lattice", "Matrix", "ROCR" ], "_score": 1.4771212547196624, "_indexed": true, "_nocasepkg": "drawr", "_universes": [ "cblatti3" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.3", "date": "2026-10-11T08:27:26.000Z", "distro": "resolute", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/25aabb61cd52e53cf207bf51f8166fe6917885d8c40aeaba3778f0a428c7401a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.6.1", "os": "linux", "version": "1.0.3", "date": "2026-10-11T08:27:17.000Z", "distro": "resolute", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/0da692488363bcd520123eee3f656712d419f3608c8e4ae3461383da9739586d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.5.3", "os": "mac", "version": "1.0.3", "date": "2026-10-11T08:32:47.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/3735249a5f127dc8f7f34814e98a990cd633732e44c57aacdd814f01d468c02c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.6.1", "os": "mac", "version": "1.0.3", "date": "2026-10-11T08:32:18.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/329c1a2a8db47f4fbd44e10a1b6e137e1efc68ac2bc4f23d2cf02affb78d5a8d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.3", "date": "2026-10-11T08:27:04.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/b0ab0568add39be6e12bc86d2e373bb92b2c2aa04dbd3122da47ddd1456e9a3d", "status": "success", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.7.0", "os": "win", "version": "1.0.3", "date": "2026-10-11T08:26:23.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/cd93e48d2fc2b91b0323650a45a41ad68cafd8b6319b2fb981c7a26aee62a4df", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.5.3", "os": "win", "version": "1.0.3", "date": "2026-10-11T08:26:12.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/f8b18f8ad9039ff058b390d968c749acec174d0c03797d7fccfb2f3c950063b9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" }, { "r": "4.6.1", "os": "win", "version": "1.0.3", "date": "2026-10-11T08:26:10.000Z", "commit": "01afe80e047b7f6fe5451cf97d1161c924d2b4a0", "fileid": "https://r2.ropensci.org/d99e934313fdb713d2d018f94baac45fde9507f602798444b85670f7fee66e53", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cblatti3/actions/runs/38124582940" } ] }